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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4495393_4504622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4495393 - 4504622

Intron Length:

9230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCAC

5'SS Class:

major

3'SS Sequence:

TGCCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTATGTAATT

Flanking Amino Acid:

PKGIPKDVTELYLEGNHLTA

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

65.7

40.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

85.7

0.8

83.8

31.2

Minor 5ss

37.4

-1.4

54.6

42.6

Minor BPS

0.17

2.1

77.31

39.6

Associated Gene:

Gene:

SLIT3

Ensembl Gene ID:

ENSAPLG00000014516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027194

4404413 - 4651834

247422

ENSAPLT00000015357

4404413 - 4651210

246798