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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4504756_4506990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4504756 - 4506990

Intron Length:

2235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CCCTTCTGAATA

Flanking Amino Acid:

DVDAQDFTCDGNDESSCLLS

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

82.1

0.72

0.7

76.6

25.4

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

55.7

0.17

1.5

58.85

41.8

Associated Gene:

Gene:

SLIT3

Ensembl Gene ID:

ENSAPLG00000014516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015357

4404413 - 4651210

246798

ENSAPLT00000027194

4404413 - 4651834

247422