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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4570200_4586205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4570200 - 4586205

Intron Length:

16006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTAACATGTATA

Flanking Amino Acid:

PANLPEDIWEIRLEQNLIKI

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

86.6

0.82

0.8

84.6

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

44.6

-0.4

59.42

Associated Gene:

Gene:

SLIT3

Ensembl Gene ID:

ENSAPLG00000014516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027194

4404413 - 4651834

247422

ENSAPLT00000015357

4404413 - 4651210

246798