Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_474050_474277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

474050 - 474277

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTATTCTCATCC

Flanking Amino Acid:

PWGRDIYTLEGIVDGAPYSM

Intron Amino Acid Position:

1089

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.8

83.1

28.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.7

0.62

0.8

69.7

36.7

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

50.4

-0

1.8

62.93

42.6

Associated Gene:

Gene:

FBXO38

Ensembl Gene ID:

ENSAPLG00000009306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009723

473095 - 492271

19177