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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4989269_4990620_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4989269 - 4990620

Intron Length:

1352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

CACTAGTTAACA

Flanking Amino Acid:

MKVRQLEKFKTLYENVEECR

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

79.1

0.65

0.9

75.8

32.8

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

48.9

-0

2.2

61.16

44.7

Associated Gene:

Gene:

SPDL1

Ensembl Gene ID:

ENSAPLG00000013147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019605

4980124 - 5002204

22081

ENSAPLT00000013721

4979076 - 4993489

14414

ENSAPLT00000047335

4979659 - 5001625

21967

ENSAPLT00000020055

4980124 - 5002204

22081