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Intron Name: Anas_platyrhynchos_platyrhynchos_14_4993285_5001474_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4993285 - 5001474

Intron Length:

8190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TGTATTTAGAAT

Flanking Amino Acid:

GNNSLTSTAPRLTTESRLET

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

70.1

0.5

70.3

31.9

Major PPT

72.6

0.51

0.9

66.3

35.8

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

46.2

-0.2

1.8

64.75

39.9

Associated Gene:

Gene:

SPDL1

Ensembl Gene ID:

ENSAPLG00000013147

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020055

4980124 - 5002204

22081

ENSAPLT00000019605

4980124 - 5002204

22081

ENSAPLT00000047335

4979659 - 5001625

21967