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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5035922_5035996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5035922 - 5035996

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

TGATCAGTAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

Major BPS

71.5

0.53

1.1

43.2

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

31.6

-2.1

2.7

34.1

41.4

Minor BPS

-0.4

2.4

61.6

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883

Gene:

Ensembl Gene ID:

ENSAPLG00000018191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044242

5013161 - 5040527

27367