Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_5091036_5093641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5091036 - 5093641

Intron Length:

2606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGGTGC

5'SS Class:

major

3'SS Sequence:

CTGTCTATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

ATTACATGAAAC

Flanking Amino Acid:

DLEKSRALSEGRNFFHTGQD

Intron Amino Acid Position:

464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

55.9

44.3

Major BPS

73.5

0.59

81.3

29.9

Major PPT

79.2

0.66

0.9

72.9

36.1

Minor 5ss

35.6

-1.6

3.4

41.2

45.5

Minor BPS

49.6

-0

1.8

65.9

38.4

Associated Gene:

Gene:

INSYN2B

Ensembl Gene ID:

ENSAPLG00000013108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013643

5084871 - 5095802

10932