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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5159454_5163807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5159454 - 5163807

Intron Length:

4354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GTGCTCTAAAAT

Flanking Amino Acid:

DEHYMQLFESILTECASQYP

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.8

34.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

39.9

-1.1

2.9

56.1

41.4

Minor BPS

49.7

0.06

1.8

67.07

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883