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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5163965_5165094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5163965 - 5165094

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAACTTTTAAAT

Flanking Amino Acid:

NRMSCTVNLLNFYKDINREG

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.1

0.63

0.9

70.2

41.3

Minor 5ss

49.1

-0.1

2.4

64.8

41.7

Minor BPS

61.1

0.43

1.3

72.66

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883