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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5167243_5168400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5167243 - 5168400

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCGATTT

5'SS Class:

major

3'SS Sequence:

TTTTTATCCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

TLLLHTWLLKWSDEQCAPQV

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.2

73.8

37.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.9

0.83

0.7

85.8

27.5

Minor 5ss

39.2

-1.2

3.3

47.1

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883