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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5168521_5170287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5168521 - 5170287

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCTG

5'SS Class:

major

3'SS Sequence:

GGTTATGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

ACTTTTTGAATA

Flanking Amino Acid:

KIIEYFDKGKMWEEAISLCK

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

57.6

46.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.52

65.5

45.1

Minor 5ss

32.3

-2

3.7

46.2

49.1

Minor BPS

59.7

0.3

1.3

65.59

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883