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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5170378_5171664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5170378 - 5171664

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TCAGACGTAATT

Flanking Amino Acid:

FDYELLSQNLIQQAKFYENI

Intron Amino Acid Position:

608

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

77.7

31.2

Major BPS

53.6

0.09

59.9

32.5

Major PPT

77.3

0.62

0.8

74.6

36.4

Minor 5ss

42.6

-0.8

3.1

56.7

42.1

Minor BPS

46.5

-0.1

2.2

65.18

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883