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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5171770_5172451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5171770 - 5172451

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAGCTG

5'SS Class:

major

3'SS Sequence:

TTATTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTCCTTTTATT

Flanking Amino Acid:

YGQGFPTFLRNKVFIYRGKE

Intron Amino Acid Position:

643

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.6

46.8

Major BPS

88.7

0.96

0.8

36.5

Major PPT

86.7

0.83

0.8

81.6

30.1

Minor 5ss

33.3

-1.9

3.5

38.7

46.5

Minor BPS

63.3

0.5

1.6

79.56

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883