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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5172594_5174040_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

5172594 - 5174040

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TTCACAATTTAAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ACAACCTTAACA

Flanking Amino Acid:

GEDVKNSPGQYIQCFTVQPV

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

60.6

40.8

Major BPS

0.75

78.6

Major PPT

63.4

0.3

1.1

65.5

39.1

Minor 5ss

90.1

1.35

1.1

85.5

31.8

Minor BPS

72.1

0.69

1.3

71.77

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883