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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5174123_5176813_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5174123 - 5176813

Intron Length:

2691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTAAATCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTTTTTTAAAT

Flanking Amino Acid:

KNKAVPDQIINFYKSNNVHR

Intron Amino Acid Position:

717

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.8

0.63

0.9

74.1

40.9

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

73.3

0.81

1.3

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883