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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5176899_5178780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5176899 - 5178780

Intron Length:

1882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TCTTTTTTAATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTTTTTTAATA

Flanking Amino Acid:

GSVDPENEFASMWIERTSFV

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

82.8

0.74

0.8

29.6

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

0.81

1.1

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883