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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5180462_5181759_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5180462 - 5181759

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ATGGAATGAATT

Flanking Amino Acid:

VMGGFAKYEKAFFTEEYIRD

Intron Amino Acid Position:

834

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

78.9

35.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

69.9

0.45

74.6

33.9

Minor 5ss

-1.7

3.8

55.2

Minor BPS

44.7

-0.3

1.9

61.54

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021535

5180142 - 5195127

14986

ENSAPLT00000012981

5034076 - 5194958

160883