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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5185528_5187070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5185528 - 5187070

Intron Length:

1543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

TCCTATTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTGATAAAA

Flanking Amino Acid:

VEKQYGARELPDFDDKRVGR

Intron Amino Acid Position:

908

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

51.6

44.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.7

0.69

0.8

75.7

32.5

Minor 5ss

40.7

-1

3.3

52.6

46.4

Minor BPS

46.8

-0.2

2.3

66.09

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012981

5034076 - 5194958

160883

ENSAPLT00000021535

5180142 - 5195127

14986