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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5192774_5194135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5192774 - 5194135

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGCAC

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

KKVNQLFKTMRISKVLEDGK

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

46.5

-0.2

1.4

54.8

42.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021535

5180142 - 5195127

14986

ENSAPLT00000012981

5034076 - 5194958

160883