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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5224618_5227028_F

Intron Information:

Intron Rank:

125960

Intron Class:

major

Intron Phase:

Intron Coordinates:

5224618 - 5227028

Intron Length:

2411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCAATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAA

U12 Branch Point Sequence:

TTTTTTCCAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

83.3

29.2

Major BPS

54.5

0.11

1.4

55.7

41.6

Major PPT

80.9

0.7

0.8

78.7

28.7

Minor 5ss

2.8

73.4

43.4

Minor BPS

53.2

0.1

1.8

71.6

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040634

5224053 - 5228845

4793