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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5290298_5290559_F

Intron Information:

Intron Rank:

135159

Intron Class:

major

Intron Phase:

Intron Coordinates:

5290298 - 5290559

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTGCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

78.9

0.65

0.8

70.3

36.3

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

47.5

-0.2

3.4

76.51

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044831

5289857 - 5292547

2691