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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5290665_5291126_F

Intron Information:

Intron Rank:

135152

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5290665 - 5291126

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCTGGTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTGTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AACTCCATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.21

1.3

59.2

42.2

Major BPS

0.75

78.6

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

39.5

-1.2

3.2

48.4

Minor BPS

62.1

0.38

1.6

68.08

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044831

5289857 - 5292547

2691

ENSAPLT00000019963

5277204 - 5292547

15344