Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_5295186_5295844_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5295186 - 5295844

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTGC

5'SS Class:

major

3'SS Sequence:

TTCCATCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATCCATTACCT

Flanking Amino Acid:

LLGTGLKGKEDFSSVADIID

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

57.8

42.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.9

0.56

0.8

68.7

31.5

Minor 5ss

36.1

-1.6

3.4

50.8

45.8

Minor BPS

59.3

0.37

1.9

80.35

40.8

Associated Gene:

Gene:

LCP2

Ensembl Gene ID:

ENSAPLG00000011852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012360

5295063 - 5326088

31026