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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5300751_5302342_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5300751 - 5302342

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATAGTAT

5'SS Class:

weak_major

3'SS Sequence:

CTCTTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAGGTTTTAAAT

Flanking Amino Acid:

GWPQQKRPEVTAPQRAVPQL

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.1

64.4

35.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.8

0.69

0.7

75.7

26.5

Minor 5ss

45.6

-0.5

3.3

43.3

Minor BPS

57.1

0.3

1.5

69.43

41.8

Associated Gene:

Gene:

LCP2

Ensembl Gene ID:

ENSAPLG00000011852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012360

5295063 - 5326088

31026