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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5303507_5304358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5303507 - 5304358

Intron Length:

852

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAACACCA

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TAGCTCTTAACT

Flanking Amino Acid:

APVSGQYLLMPLTPQLRSLG

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

41.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

88.7

0.87

0.7

83.2

31.9

Minor 5ss

37.9

-1.4

3.1

46.2

Minor BPS

74.8

0.86

1.2

82.46

38.5

Associated Gene:

Gene:

LCP2

Ensembl Gene ID:

ENSAPLG00000011852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012360

5295063 - 5326088

31026