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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5304731_5306008_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5304731 - 5306008

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTATGTTTC

5'SS Class:

weak_major

3'SS Sequence:

AAATATTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

GTGACTTTAACC

Flanking Amino Acid:

PASFGGRGASLPPFPPLPSN

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

68.2

37.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

74.6

0.55

70.4

44.3

Minor 5ss

63.2

0.45

2.2

79.6

33.9

Minor BPS

70.1

0.61

1.3

71.84

39.3

Associated Gene:

Gene:

LCP2

Ensembl Gene ID:

ENSAPLG00000011852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012360

5295063 - 5326088

31026