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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5310038_5319718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5310038 - 5319718

Intron Length:

9681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCTTTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TCTCTTTTAAAC

Flanking Amino Acid:

DIQKFPKLRVPIVSKLSQEI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

74.5

37.6

Major BPS

74.9

0.62

67.3

39.2

Major PPT

75.8

0.58

0.9

73.1

35.1

Minor 5ss

36.9

-1.5

2.7

46.9

41.8

Minor BPS

62.6

0.37

1.4

68.31

37.2

Associated Gene:

Gene:

LCP2

Ensembl Gene ID:

ENSAPLG00000011852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012360

5295063 - 5326088

31026