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Intron Name: Anas_platyrhynchos_platyrhynchos_14_536112_601218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

536112 - 601218

Intron Length:

65107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGCCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCAAT

U12 Branch Point Sequence:

GGAGTCCCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

59.3

0.23

1.3

66.9

37.7

Major PPT

81.5

0.71

0.8

81.5

30.5

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

42.9

-0.4

1.8

55.15

40.6

Associated Gene:

Gene:

IL12B

Ensembl Gene ID:

ENSAPLG00000009092

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009477

524559 - 601709

77151