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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5398704_5400206_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

5398704 - 5400206

Intron Length:

1503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

TCTTAAAAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CTTTTCTTAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

0.75

78.6

Major PPT

57.5

0.17

50.3

41.8

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

75.2

0.79

1.3

80.08

35.8

Associated Gene:

Gene:

KCNMB1

Ensembl Gene ID:

ENSAPLG00000011791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012268

5397282 - 5400319

3038