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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5783319_5790439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5783319 - 5790439

Intron Length:

7121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATTATTT

Flanking Amino Acid:

LQVLYRGFKNECPSGVVNEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.4

32.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.5

66.7

39.5

Minor 5ss

36.2

-1.6

46.6

41.5

Minor BPS

52.4

0.15

2.2

80.9

41.2

Associated Gene:

Gene:

KCNIP1

Ensembl Gene ID:

ENSAPLG00000011343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011823

5710348 - 5798582

88235

ENSAPLT00000029542

5765026 - 5798582

33557

ENSAPLT00000029223

5588502 - 5798582

210081