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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5790510_5792678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5790510 - 5792678

Intron Length:

2169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAG

U12 Branch Point Sequence:

TTGTACTGAGCA

Flanking Amino Acid:

QIYAQFFPHGDASMYAHYLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

59.6

0.24

1.5

57.3

41.7

Major PPT

84.8

0.78

0.9

76.9

42.1

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

52.9

0.09

1.9

69.66

42.2

Associated Gene:

Gene:

KCNIP1

Ensembl Gene ID:

ENSAPLG00000011343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029542

5765026 - 5798582

33557

ENSAPLT00000029223

5588502 - 5798582

210081

ENSAPLT00000011823

5710348 - 5798582

88235