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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5792750_5794900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5792750 - 5794900

Intron Length:

2151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTGAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTGCCTTGAACC

Flanking Amino Acid:

TAQNGSVKFEDFVMALSILL

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

61.8

0.27

1.1

43.9

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

58.4

0.24

1.5

64.46

41.2

Associated Gene:

Gene:

KCNIP1

Ensembl Gene ID:

ENSAPLG00000011343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011823

5710348 - 5798582

88235

ENSAPLT00000029542

5765026 - 5798582

33557

ENSAPLT00000029223

5588502 - 5798582

210081