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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5795009_5795982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5795009 - 5795982

Intron Length:

974

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GTCACTACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

ATGTCACTACTA

Flanking Amino Acid:

INKDGYINKEEMMDIVKAIY

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

0.45

0.9

38.6

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

45.2

-0.3

2.1

59.57

40.4

Associated Gene:

Gene:

KCNIP1

Ensembl Gene ID:

ENSAPLG00000011343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011823

5710348 - 5798582

88235

ENSAPLT00000029542

5765026 - 5798582

33557

ENSAPLT00000029223

5588502 - 5798582

210081