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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5796721_5798534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5796721 - 5798534

Intron Length:

1814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCATTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CAGTGCTGAAAA

Flanking Amino Acid:

LDEFIESCQEDDNIMRSLQL

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.3

0.68

0.9

77.1

36.9

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

46.5

-0.2

54.66

43.6

Associated Gene:

Gene:

KCNIP1

Ensembl Gene ID:

ENSAPLG00000011343

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029542

5765026 - 5798582

33557

ENSAPLT00000029223

5588502 - 5798582

210081

ENSAPLT00000011823

5710348 - 5798582

88235