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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5828829_5830336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5828829 - 5830336

Intron Length:

1508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAT

U12 Branch Point Sequence:

GGATGCTCAGCC

Flanking Amino Acid:

SISSISESDMDYTATIYLRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

34.4

Major BPS

58.9

0.22

1.5

59.3

47.1

Major PPT

79.8

0.67

0.7

72.4

32.3

Minor 5ss

28.7

-2.4

3.5

43.2

Minor BPS

44.2

-0.4

2.1

53.59

43.4

Associated Gene:

Gene:

GABRP

Ensembl Gene ID:

ENSAPLG00000011181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011646

5825047 - 5835325

10279