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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5860289_5861899_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5860289 - 5861899

Intron Length:

1611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTACAGGTA

5'SS Class:

weak_major

3'SS Sequence:

TCTCTTCTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

TCTCTTCTAAAA

Flanking Amino Acid:

FLPGDDAHISARGGPQKYGV

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.1

51.6

39.6

Major BPS

68.7

0.46

71.3

Major PPT

69.2

0.43

1.1

71.6

31.9

Minor 5ss

33.3

-1.9

50.5

47.4

Minor BPS

48.9

-0

1.7

62.17

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041390

5849493 - 5862079

12587

ENSAPLT00000018397

5851757 - 5862079

10323