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Intron Name: Anas_platyrhynchos_platyrhynchos_14_5998961_6000101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5998961 - 6000101

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGCAAT

5'SS Class:

major

3'SS Sequence:

TTCTTTCCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

TCCATATCAATG

Flanking Amino Acid:

LLSVSHSDLLQYRKLSQSYY

Intron Amino Acid Position:

880

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

73.4

37.2

Major BPS

70.2

0.5

72.1

Major PPT

0.76

0.7

77.2

31.6

Minor 5ss

42.9

-0.8

2.9

59.3

40.4

Minor BPS

43.6

-0.6

1.8

44.7

41.8

Associated Gene:

Gene:

RANBP17

Ensembl Gene ID:

ENSAPLG00000010566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046189

5869256 - 6029774

160519

ENSAPLT00000022928

5869256 - 6029774

160519

ENSAPLT00000011073

5869256 - 6029774

160519