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Intron Name: Anas_platyrhynchos_platyrhynchos_14_60132_60759_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
60132 - 60759

Intron Length:
628

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGAACC

5'SS Class:
strong_major

3'SS Sequence:
CTTTGCACTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAA

U12 Branch Point Sequence:
GGTGCTCAAACA

Flanking Amino Acid:
FTEGEEMYLTGSEVWHPICK

Intron Amino Acid Position:
302

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
72.5
37.3

Major BPS
70.6
0.51
1.1
71.6
36.4

Major PPT
78.4
0.64
0.9
74.6
34.9

Minor 5ss
33.3
-1.9
3.1
43.9
43.5

Minor BPS
45.3
-0.3
2
57.26
42.1

Associated Gene:

Gene:
ABLIM3

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28564 - 68885
40322

28564 - 68885
40322

28337 - 69087
40751

28564 - 68885
40322