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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6042060_6044467_F

Intron Information:

Intron Rank:

129633

Intron Class:

major

Intron Phase:

Intron Coordinates:

6042060 - 6044467

Intron Length:

2408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TCTTTCCTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

0.54

0.9

70.9

33.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

55.8

0.16

70.2

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047087

6041396 - 6045985

4590