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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6042060_6058178_F

Intron Information:

Intron Rank:

129631

Intron Class:

major

Intron Phase:

Intron Coordinates:

6042060 - 6058178

Intron Length:

16119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCAGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TTATCAATGATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

0.72

80.3

31.7

Major PPT

74.5

0.55

0.8

71.6

28.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

51.7

0.05

1.9

69.52

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019766

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032492

6041396 - 6058645

17250