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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6081998_6084487_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6081998 - 6084487

Intron Length:
2490

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTTTT

5'SS Class:
strong_major

3'SS Sequence:
TTTTTCAAAATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTTTTTTCAAAA

Flanking Amino Acid:
KAKMQASIDKGSSLPKLEPK

Intron Amino Acid Position:
68

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.9
1.06
0.6
93
14.8

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
70.9
0.47
1
68.4
36.4

Minor 5ss
40.7
-1
3
57.8
46.8

Minor BPS
63.5
0.42
1.6
76.4
34.4

Associated Gene:

Gene:
FGF18

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6079705 - 6163118
83414