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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6213879_6219606_R

Intron Information:

Intron Rank:

130047

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6213879 - 6219606

Intron Length:

5728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTACA

5'SS Class:

major

3'SS Sequence:

TCCCAATGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTCTTCCCAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

38.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

57.8

0.18

1.1

53.5

40.2

Minor 5ss

29.7

-2.3

2.8

34.5

41.3

Minor BPS

48.9

-0.2

1.9

59.67

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027109

6213836 - 6226166

12331