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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6221177_6226148_R

Intron Information:

Intron Rank:

130044

Intron Class:

major

Intron Phase:

Intron Coordinates:

6221177 - 6226148

Intron Length:

4972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GGCTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

ATGGCATCAGAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

75.5

0.57

68.5

42.1

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

39.6

-0.8

47.79

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027109

6213836 - 6226166

12331

ENSAPLT00000025375

6214399 - 6229140

14742