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Intron Name: Anas_platyrhynchos_platyrhynchos_14_63991_65332_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
63991 - 65332

Intron Length:
1342

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGCTCC

5'SS Class:
major

3'SS Sequence:
TCTTCCCCAGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCTT

U12 Branch Point Sequence:
TCTTCCCCAGCA

Flanking Amino Acid:
YQAPKHFHIPAGESNIYRKP

Intron Amino Acid Position:
484

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
1
66.7
40.1

Major BPS
39.5
-0.6
4.3
85.7
34.9

Major PPT
75.4
0.57
0.8
71.1
28.5

Minor 5ss
43.7
-0.7
3.1
59.5
45.4

Minor BPS
49.2
-0
2.1
68.63
43.5

Associated Gene:

Gene:
ABLIM3

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28564 - 68885
40322

28337 - 69087
40751