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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6509006_6510177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6509006 - 6510177

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCATGTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

TTTATCTCATGT

Flanking Amino Acid:

VSASGDRTIKVWSTSTCEFV

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

77.4

0.62

0.9

71.6

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

47.6

-0.1

2.1

72.46

44.4

Associated Gene:

Gene:

FBXW11

Ensembl Gene ID:

ENSAPLG00000009963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028187

6501517 - 6570715

69199

ENSAPLT00000038741

6505294 - 6570715

65422

ENSAPLT00000010400

6505294 - 6570715

65422

ENSAPLT00000035913

6501517 - 6570715

69199

ENSAPLT00000035511

6505294 - 6570715

65422

ENSAPLT00000034511

6501517 - 6554783

53267

ENSAPLT00000048285

6505294 - 6559450

54157