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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6512328_6523532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6512328 - 6523532

Intron Length:

11205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAC

U12 Branch Point Sequence:

TCGTGCCTAACT

Flanking Amino Acid:

LYPKIIQDIETIESNWRCGR

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

54.3

0.11

1.2

57.5

37.5

Major PPT

72.2

0.5

0.9

71.7

32.8

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

55.5

0.25

2.1

76.3

46.1

Associated Gene:

Gene:

FBXW11

Ensembl Gene ID:

ENSAPLG00000009963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038741

6505294 - 6570715

65422

ENSAPLT00000028187

6501517 - 6570715

69199

ENSAPLT00000035913

6501517 - 6570715

69199

ENSAPLT00000010400

6505294 - 6570715

65422

ENSAPLT00000035511

6505294 - 6570715

65422

ENSAPLT00000034511

6501517 - 6554783

53267

ENSAPLT00000048285

6505294 - 6559450

54157