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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6611936_6613556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6611936 - 6613556

Intron Length:

1621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATCAT

U12 Branch Point Sequence:

GCTGCATCATGT

Flanking Amino Acid:

EFKDQLPADECNKLKEEIAK

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.9

33.8

Major BPS

57.9

0.2

1.4

44.2

Major PPT

78.3

0.64

0.9

37.3

Minor 5ss

26.1

-2.7

3.2

33.4

42.6

Minor BPS

38.7

-0.7

2.2

53.8

47.1

Associated Gene:

Gene:

HSPA9

Ensembl Gene ID:

ENSAPLG00000009263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009695

6610397 - 6627943

17547