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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6613650_6615796_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6613650 - 6615796

Intron Length:

2147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

AGGCCCTGATGA

Flanking Amino Acid:

KYAEEDRRRKERVEAVNMAE

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

79.8

0.67

0.7

72.4

32.3

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

-0.5

1.9

49.12

41.1

Associated Gene:

Gene:

HSPA9

Ensembl Gene ID:

ENSAPLG00000009263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009695

6610397 - 6627943

17547