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Intron Name: Anas_platyrhynchos_platyrhynchos_14_6615892_6617451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6615892 - 6617451

Intron Length:

1560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTAATGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATGTTAATT

Flanking Amino Acid:

KDKGTGREQQIVIQSSGGLS

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.9

0.65

0.9

74.3

34.1

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

56.4

0.28

2.1

76.97

39.8

Associated Gene:

Gene:

HSPA9

Ensembl Gene ID:

ENSAPLG00000009263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009695

6610397 - 6627943

17547